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bionumerics program  (Applied Maths)
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the <t>BioNumerics</t> and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.
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program bionumerics 6.6  (Applied Maths)
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the <t>BioNumerics</t> and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.
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genome analysis tools module of the bionumerics program  (Applied Maths)
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the <t>BioNumerics</t> and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the <t>BioNumerics</t> and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.
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clustering program bionumerics  (Applied Maths)
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the <t>BioNumerics</t> and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.
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mlva plugin of the bionumerics program  (Applied Maths)
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the <t>BioNumerics</t> and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.
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Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the BioNumerics and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.

Journal: Frontiers in Microbiology

Article Title: The diverse virulence potential of atypical enteropathogenic Escherichia coli isolated from diarrhea: the emergence of a hybrid pathotype?

doi: 10.3389/fmicb.2025.1599350

Figure Lengend Snippet: Dendrogram of six aEPEC presenting hybrid genotypes. Amplification profiles obtained in RAPD-PCR using primer 1247 (A) and primer 1283 (B) were evaluated by the BioNumerics and used to build the dendrogram. Note the proximity among strains 0811–4, 2071–1, 1482–11, and 2332–7. Strains 1551–3 and 3712–3 were less correlated. The red dashed line represents the cutoff of 90% similarity in the amplification pattern used to determine the clonality of the strains.

Article Snippet: To determine a clonal relationship, the amplification pattern obtained for both primers was evaluated by the BioNumerics program version 7.6.3 (Applied Maths, Sint-Martens-Latem, Belgium).

Techniques: Amplification